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KMID : 0364820230590020145
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Korean Journal of Microbiology
2023 Volume.59 No. 2 p.145 ~ p.147
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Complete genome sequence of Amylibacter sp. IMCC11727 isolated from the East Sea, South Korea
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Kim Su-Min
Lim Yeon-Jung
Kang Il-Nam
Cho Jang-Cheon
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Abstract
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The genus Amylibacter belonging to the family Rhodobacteraceae of the class Alphaproteobacteria is known as Gram-negative, aerobic, and rod-shaped bacterium. In this study, we report the complete genome sequence of Amylibacter sp. IMCC11727 (= KCTC 52246 = KACC 18775), isolated from the East Sea of South Korea. The genome of strain IMCC11727 was sequenced using the PacBio RSII platform and subsequently assembled into a single circular contig with a size of 3,452,935 bp and a G + C content of 53.7%. The genome encoded 3,474 proteincoding sequences and genes for 3 rRNAs and 38 tRNAs. Strain IMCC11727 is suggested to be a candidate for a novel species in the genus Amylibacter, with metabolic potential for cobalamin biosynthesis and dimethylsulfoniopropionate (DMSP) degradation.
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KEYWORD
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Amylibacter, complete genome, dimethylsulfoniopropionate, OM42 clade, Rhodobacteraceae
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